Since their
introduction in the 1990s, microarray-based technologies have had a tremendous
impact on the biological sciences. One of the most exciting recent developments
in this field is functional protein microarrays: microarrays with large numbers
of correctly folded and functional proteins. Initially considered an
impractical if not impossible goal, high-content functional protein microarrays
have now proven their utility in a multitude of applications. While the ‘‘field’s”
early successes have set the stage for the rapid growth now being witnessed, it
is not without its challenges. Indeed, challenges are to be expected in a
fast-moving interdisciplinary endeavor such as this, where molecular biology,
protein chemistry, bioinformatics, engineering, and physical sciences all
intersect.
Currently no
book has addressed all aspects of functional protein microarrays in a coherent
and integrated fashion. This book is intended to provide the first comprehensive
reference for the field, addressing basic principles, methods, and applications.
While intended primarily as a reference for industrial, academic, and government
scientists, it is also suitable as a graduate-level supplementary text. The book
is divided into five main sections, each addressing critical aspects of the
field. The first focuses on the generation of functional protein content, which
is the first and perhaps most challenging aspect of protein microarrays. The
second section describes both “standard” and state-of-the-art fabrication
methods, focusing on issues of particular significance to functional protein
microarrays. Similarly, the third section reviews current and next-generation
approaches to assay detection, which hold one key to the future of the field.
The fourth and largest section is dedicated to applications. This section spans
the breadth of published applications, from biomolecular interaction discovery
and characterization (proteins, antibodies, DNA, small molecules) to humoral
response biomarker profiling, enzyme substrate identification, and drug
discovery. The final section addresses fundamental computational issues
including image and data analysis as well as data visualization. The intent of
this book is to provide the first integrated reference for functional protein
microarrays.
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